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Academic Research

Scientific Scvelo

RNA velocity analysis with scVelo. Estimate cell state transitions from unspliced/spliced mRNA dynamics, infer trajectory directions, compute latent time, and identify driver genes in single-cell RNA-seq data. Complements Scanpy/scVI-tools for tra...

10 minutes
Intermediate
Academic Research

Scientific Scvi Tools

Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with uncertainty, or multi-modal integration (TOTALVI, MultiVI). Best for advanced modeling, batch ef...

15 minutes
Advanced
Data & Reporting

Scientific Seaborn

Statistical visualization with pandas integration. Use for quick exploration of distributions, relationships, and categorical comparisons with attractive defaults. Best for box plots, violin plots, pair plots, heatmaps. Built on matplotlib. For in...

5 minutes
Beginner
Data & Reporting

Scientific Shap

Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP plots (waterfall, beeswarm, bar, scatter, force,...

10 minutes
Intermediate
Data & Reporting

Scientific Simpy

Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems with processes, queues, resources, and time-based events such as manufacturing systems, service operations, network traffic, logistics...

10 minutes
Intermediate
Developer Tools

Scientific Stable Baselines3

Production-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm implementations. Best for single-agent RL with Gymnasi...

15 minutes
Advanced
Data & Reporting

Scientific Statistical Analysis

Guided statistical analysis with test selection and reporting. Use when you need help choosing appropriate tests for your data, assumption checking, power analysis, and APA-formatted results. Best for academic research reporting, test selection gu...

10 minutes
Intermediate
Data & Reporting

Scientific Statsmodels

Statistical models library for Python. Use when you need specific model classes (OLS, GLM, mixed models, ARIMA) with detailed diagnostics, residuals, and inference. Best for econometrics, time series, rigorous inference with coefficient tables. Fo...

10 minutes
Intermediate
Academic Research

Scientific String Database

Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.

5 minutes
Beginner
Developer Tools

Scientific Sympy

Use this skill when working with symbolic mathematics in Python. This skill should be used for symbolic computation tasks including solving equations algebraically, performing calculus operations (derivatives, integrals, limits), manipulating alge...

10 minutes
Intermediate
Academic Research

Scientific Tiledbvcf

Efficient storage and retrieval of genomic variant data using TileDB. Scalable VCF/BCF ingestion, incremental sample addition, compressed storage, parallel queries, and export capabilities for population genomics.

15 minutes
Advanced
Data & Reporting

Scientific Timesfm Forecasting

Zero-shot time series forecasting with Google's TimesFM foundation model. Use for any univariate time series (sales, sensors, energy, vitals, weather) without training a custom model. Supports CSV/DataFrame/array inputs with point forecasts and pr...

15 minutes
Advanced
Data & Reporting

Scientific Torch Geometric

Graph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs, molecular property prediction, for geometric deep learning.

15 minutes
Advanced
Academic Research

Scientific Torchdrug

PyTorch-native graph neural networks for molecules and proteins. Use when building custom GNN architectures for drug discovery, protein modeling, or knowledge graph reasoning. Best for custom model development, protein property prediction, retrosy...

15 minutes
Advanced
Developer Tools

Scientific Transformers

This skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal tasks. Use for text generation, classification, question answering, translation, summarization, image...

15 minutes
Advanced
Academic Research

Scientific Treatment Plans

Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain...

10 minutes
Intermediate
Data & Reporting

Scientific Umap Learn

UMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), supervised/parametric UMAP, for high-dimensional data.

10 minutes
Intermediate
Academic Research

Scientific Uniprot Database

Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services). Use this for direct HTTP/REST work or UniPro...

5 minutes
Beginner
Finance

Scientific Usfiscaldata

Query the U.S. Treasury Fiscal Data API for federal financial data including national debt, government spending, revenue, interest rates, exchange rates, and savings bonds. Access 54 datasets and 182 data tables with no API key required. Use when ...

5 minutes
Beginner
Academic Research

Scientific Uspto Database

Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

5 minutes
Beginner
Data & Reporting

Scientific Vaex

Use this skill for processing and analyzing large tabular datasets (billions of rows) that exceed available RAM. Vaex excels at out-of-core DataFrame operations, lazy evaluation, fast aggregations, efficient visualization of big data, and machine ...

10 minutes
Intermediate
Research & Writing

Scientific Venue Templates

Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and grant propo...

10 minutes
Intermediate
Research & Writing

Scientific What If Oracle

Run structured What-If scenario analysis with multi-branch possibility exploration. Use this skill when the user asks speculative questions like 'what if...', 'what would happen if...', 'what are the possibilities', 'explore scenarios', 'scenario ...

15 minutes
Advanced
Creative & Design

Scientific Xlsx

'Use this skill any time a spreadsheet file is the primary input or output. This means any task where the user wants to: open, read, edit, or fix an existing .xlsx, .xlsm, .csv, or .tsv file (e.g., adding columns, computing formulas, formatting, c...

5 minutes
Beginner

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Personal Productivity

File Organization

Auto-rename, sort, deduplicate, and organize files

Personal Productivity

Note Management

Obsidian, Logseq, and note-taking workflows

Personal Productivity

Task Management

Todo lists, project tracking, and productivity

Personal Productivity

Productivity

Dashboards, automation, and workflow optimization

Personal Productivity

Knowledge Management

Second brain, research synthesis, and information organization

Career & Development

Career Development

Resume, interviews, job search, and career growth

Career & Development

Personal Development

Habits, journaling, and self-improvement

Career & Development

Education

Study guides, learning, and skill development

Research & Writing

Research & Writing

PDF analysis, academic research, and content creation

Research & Writing

Market Research

Competitor analysis, market sizing, and business planning

Finance & Accounting

Finance & Accounting

Expense tracking, invoicing, and financial analysis

Finance & Accounting

Finance

Budgets, expenses, and personal finance

Marketing & Content

Marketing & Content

Ad copy, SEO, social media, and content marketing

Legal & Compliance

Legal & Compliance

Contract review, legal research, and compliance

HR & Recruiting

HR & Recruiting

Resume screening, job descriptions, and HR workflows

Creative & Design

Creative & Design

Worldbuilding, creative writing, and game design

Creative & Design

Creative Writing

Fiction, worldbuilding, and storytelling assistance

Developer Tools

Developer Tools

Changelogs, documentation, and development workflows

Academic Research

Academic Research

Research workflows, literature review, manuscript review, and academic writing

Executive Strategy

Executive Strategy

CEO advisory, competitive intelligence, startup analysis, and strategic foresight

Sales & Revenue

Sales & Revenue

Pipeline management, customer success, revenue operations, and sales automation

Project Management

Project Management

Agile workflows, sprint planning, scrum ceremonies, and team coordination

Media Production

Media Production

Podcast workflows, video clip creation, content repurposing, and production management

Communications

Communications

Proposals, press releases, newsletters, speeches, and professional communication

Operations & Compliance

Operations & Compliance

SOPs, policy documentation, vendor evaluation, audits, and change management

Data & Reporting

Data & Reporting

Dashboard narratives, KPI analysis, survey reports, and data quality assessment

Customer Support

Customer Support

Ticket triage, escalation, KB articles, and response drafting

Science & Research

Bio Research

Bioinformatics, lab data processing, and scientific workflows

Product Management

Product Management

Feature specs, metrics review, roadmaps, and product strategy

Financial Services

Equity Research

Earnings analysis, sector overviews, coverage initiation, and investment thesis tracking

Financial Services

Investment Banking

Deal execution, pitch decks, CIMs, merger models, and buyer lists

Financial Services

Private Equity

Deal sourcing, due diligence, IC memos, portfolio monitoring, and value creation

Financial Services

Wealth Management

Client reports, financial planning, portfolio rebalancing, and tax optimization

Financial Services

Trading & Markets

Fixed income, FX, options, macro analysis, and quantitative trading strategies